Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2ABP04908 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2ABP04908 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC008764.6-201ENST00000595909 2069 ntBASIC16.44■□□□□ 0.22
HIST1H2ABP04908 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.44■□□□□ 0.22
HIST1H2ABP04908 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 FAM87A-204ENST00000613235 858 ntBASIC16.44■□□□□ 0.22
HIST1H2ABP04908 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2ABP04908 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SEC1P-202ENST00000473944 940 ntBASIC16.43■□□□□ 0.22
HIST1H2ABP04908 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 AC066615.1-201ENST00000640911 628 ntBASIC16.43■□□□□ 0.22
HIST1H2ABP04908 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2ABP04908 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 FER1L4-210ENST00000615531 5998 ntBASIC16.42■□□□□ 0.22
HIST1H2ABP04908 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.42■□□□□ 0.22
HIST1H2ABP04908 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 LIN28AP1-201ENST00000429574 405 ntBASIC16.42■□□□□ 0.22
HIST1H2ABP04908 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST1H2ABP04908 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms