Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC093484.2-201ENST00000580996 2166 ntBASIC19.29■□□□□ 0.68
CSPG5O95196 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.29■□□□□ 0.68
CSPG5O95196 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 OR7E14P-202ENST00000530490 1290 ntBASIC19.29■□□□□ 0.68
CSPG5O95196 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 INTS4P1-201ENST00000438455 1935 ntBASIC19.28■□□□□ 0.68
CSPG5O95196 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSPG5O95196 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.28■□□□□ 0.68
CSPG5O95196 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.28■□□□□ 0.68
CSPG5O95196 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 RNA5SP415-201ENST00000517246 115 ntBASIC19.28■□□□□ 0.68
CSPG5O95196 IGHV3-22-201ENST00000520721 359 ntBASIC19.28■□□□□ 0.68
CSPG5O95196 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.28■□□□□ 0.68
CSPG5O95196 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.28■□□□□ 0.68
CSPG5O95196 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 TNXA-203ENST00000507684 2038 ntBASIC19.28■□□□□ 0.68
CSPG5O95196 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CSPG5O95196 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.28■□□□□ 0.68
CSPG5O95196 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.28■□□□□ 0.68
CSPG5O95196 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG5O95196 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.27■□□□□ 0.68
CSPG5O95196 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.27■□□□□ 0.68
CSPG5O95196 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CSPG5O95196 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.27■□□□□ 0.68
CSPG5O95196 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 MTCL1P1-201ENST00000446207 792 ntBASIC19.27■□□□□ 0.68
CSPG5O95196 KRT18P3-201ENST00000451602 1288 ntBASIC19.27■□□□□ 0.68
CSPG5O95196 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.27■□□□□ 0.68
CSPG5O95196 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.27■□□□□ 0.68
CSPG5O95196 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.27■□□□□ 0.68
CSPG5O95196 AC034105.1-201ENST00000563488 319 ntBASIC19.27■□□□□ 0.68
CSPG5O95196 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 AL355385.1-201ENST00000606123 409 ntBASIC19.27■□□□□ 0.68
CSPG5O95196 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.27■□□□□ 0.68
CSPG5O95196 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG5O95196 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
CSPG5O95196 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG5O95196 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG5O95196 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG5O95196 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG5O95196 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG5O95196 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSPG5O95196 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.26■□□□□ 0.67
CSPG5O95196 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 AP005117.1-201ENST00000584346 1413 ntBASIC19.26■□□□□ 0.67
CSPG5O95196 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG5O95196 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms