Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UPK1BO75841 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.7■□□□□ 0.1
UPK1BO75841 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK1BO75841 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UPK1BO75841 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1BO75841 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
UPK1BO75841 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
UPK1BO75841 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1BO75841 AL355472.2-201ENST00000422958 438 ntBASIC15.69■□□□□ 0.1
UPK1BO75841 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1BO75841 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 PAUPAR-201ENST00000630360 2965 ntBASIC15.69■□□□□ 0.1
UPK1BO75841 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 LINC02228-203ENST00000641970 1355 ntBASIC15.69■□□□□ 0.1
UPK1BO75841 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
UPK1BO75841 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1BO75841 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1BO75841 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 AC004854.2-201ENST00000608450 1441 ntBASIC15.68■□□□□ 0.1
UPK1BO75841 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
UPK1BO75841 HLA-J-201ENST00000462773 1622 ntBASIC15.68■□□□□ 0.1
UPK1BO75841 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
UPK1BO75841 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1BO75841 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1BO75841 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UPK1BO75841 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.68■□□□□ 0.1
UPK1BO75841 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.68■□□□□ 0.1
UPK1BO75841 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.68■□□□□ 0.1
UPK1BO75841 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 AC013268.1-206ENST00000638368 961 ntBASIC15.68■□□□□ 0.1
UPK1BO75841 AC112229.1-201ENST00000639295 961 ntBASIC15.68■□□□□ 0.1
UPK1BO75841 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.68■□□□□ 0.1
UPK1BO75841 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1BO75841 AC104640.1-201ENST00000562617 2109 ntBASIC15.68■□□□□ 0.1
UPK1BO75841 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1BO75841 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UPK1BO75841 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms