Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
GPC4O75487 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.07■□□□□ 0.48
GPC4O75487 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.07■□□□□ 0.48
GPC4O75487 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
GPC4O75487 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.07■□□□□ 0.48
GPC4O75487 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
GPC4O75487 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 AC009102.3-201ENST00000623118 1491 ntBASIC18.07■□□□□ 0.48
GPC4O75487 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC4O75487 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GPC4O75487 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC4O75487 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC4O75487 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.06■□□□□ 0.48
GPC4O75487 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
GPC4O75487 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GPC4O75487 AC104076.2-201ENST00000448912 469 ntBASIC18.06■□□□□ 0.48
GPC4O75487 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC4O75487 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.06■□□□□ 0.48
GPC4O75487 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 AC009065.1-201ENST00000564055 1225 ntBASIC18.06■□□□□ 0.48
GPC4O75487 RN7SL850P-201ENST00000579959 291 ntBASIC18.06■□□□□ 0.48
GPC4O75487 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC4O75487 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GPC4O75487 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 ESPNP-201ENST00000270691 2015 ntBASIC18.05■□□□□ 0.48
GPC4O75487 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
GPC4O75487 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GPC4O75487 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.05■□□□□ 0.48
GPC4O75487 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms