Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM3O75382 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM3O75382 AC112777.1-201ENST00000540175 1423 ntBASIC16.81■□□□□ 0.28
TRIM3O75382 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM3O75382 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRIM3O75382 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM3O75382 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM3O75382 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 SIRPAP1-201ENST00000448467 1770 ntBASIC16.81■□□□□ 0.28
TRIM3O75382 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM3O75382 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM3O75382 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM3O75382 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM3O75382 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM3O75382 AL645929.1-201ENST00000420084 975 ntBASIC16.8■□□□□ 0.28
TRIM3O75382 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM3O75382 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM3O75382 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM3O75382 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM3O75382 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
TRIM3O75382 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM3O75382 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM3O75382 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM3O75382 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM3O75382 MIR662-201ENST00000384847 95 ntBASIC16.79■□□□□ 0.28
TRIM3O75382 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM3O75382 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM3O75382 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM3O75382 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM3O75382 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM3O75382 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM3O75382 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM3O75382 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM3O75382 AC073592.3-201ENST00000625118 1834 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms