Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNND1O60716 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNND1O60716 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNND1O60716 AC005104.2-201ENST00000427818 678 ntBASIC20.96■□□□□ 0.95
CTNND1O60716 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CTNND1O60716 AC122714.2-201ENST00000502787 707 ntBASIC20.96■□□□□ 0.95
CTNND1O60716 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.96■□□□□ 0.95
CTNND1O60716 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.96■□□□□ 0.95
CTNND1O60716 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNND1O60716 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CTNND1O60716 AP002414.3-201ENST00000589352 1468 ntBASIC20.95■□□□□ 0.94
CTNND1O60716 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CTNND1O60716 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNND1O60716 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNND1O60716 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.95■□□□□ 0.94
CTNND1O60716 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.95■□□□□ 0.94
CTNND1O60716 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNND1O60716 KRT18P3-201ENST00000451602 1288 ntBASIC20.95■□□□□ 0.94
CTNND1O60716 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.95■□□□□ 0.94
CTNND1O60716 AC092183.1-201ENST00000469884 875 ntBASIC20.95■□□□□ 0.94
CTNND1O60716 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.95■□□□□ 0.94
CTNND1O60716 UNC93B6-202ENST00000528242 690 ntBASIC20.95■□□□□ 0.94
CTNND1O60716 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.95■□□□□ 0.94
CTNND1O60716 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNND1O60716 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.95■□□□□ 0.94
CTNND1O60716 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.95■□□□□ 0.94
CTNND1O60716 AC073592.4-201ENST00000623827 446 ntBASIC20.95■□□□□ 0.94
CTNND1O60716 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CTNND1O60716 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNND1O60716 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNND1O60716 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNND1O60716 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNND1O60716 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.95■□□□□ 0.94
CTNND1O60716 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CTNND1O60716 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNND1O60716 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CTNND1O60716 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNND1O60716 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNND1O60716 AD001527.2-201ENST00000622994 785 ntBASIC20.94■□□□□ 0.94
CTNND1O60716 AL022326.1-202ENST00000641533 845 ntBASIC20.94■□□□□ 0.94
CTNND1O60716 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNND1O60716 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CTNND1O60716 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNND1O60716 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CTNND1O60716 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNND1O60716 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNND1O60716 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 AC010460.3-201ENST00000511359 1579 ntBASIC20.93■□□□□ 0.94
CTNND1O60716 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTNND1O60716 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTNND1O60716 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CTNND1O60716 PRYP5-201ENST00000451909 266 ntBASIC20.93■□□□□ 0.94
CTNND1O60716 BX005266.1-201ENST00000473402 457 ntBASIC20.93■□□□□ 0.94
CTNND1O60716 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.93■□□□□ 0.94
CTNND1O60716 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms