Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.18■□□□□ 0.18
ZIC3O60481 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
ZIC3O60481 POM121L3P-201ENST00000419331 1163 ntBASIC16.18■□□□□ 0.18
ZIC3O60481 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.18■□□□□ 0.18
ZIC3O60481 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.18■□□□□ 0.18
ZIC3O60481 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.18■□□□□ 0.18
ZIC3O60481 BNIP3P18-201ENST00000593976 575 ntBASIC16.18■□□□□ 0.18
ZIC3O60481 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.18■□□□□ 0.18
ZIC3O60481 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.18■□□□□ 0.18
ZIC3O60481 AC097374.2-201ENST00000618617 1306 ntBASIC16.18■□□□□ 0.18
ZIC3O60481 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZIC3O60481 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZIC3O60481 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 AC100803.2-201ENST00000562459 1963 ntBASIC16.17■□□□□ 0.18
ZIC3O60481 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.17■□□□□ 0.18
ZIC3O60481 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 AC138894.3-201ENST00000603787 634 ntBASIC16.17■□□□□ 0.18
ZIC3O60481 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZIC3O60481 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZIC3O60481 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.17■□□□□ 0.18
ZIC3O60481 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.16■□□□□ 0.18
ZIC3O60481 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.16■□□□□ 0.18
ZIC3O60481 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.16■□□□□ 0.18
ZIC3O60481 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 AC096633.1-201ENST00000422446 749 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 KRT16P4-201ENST00000453883 522 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 KRT18P31-201ENST00000506277 1292 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
ZIC3O60481 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 AC009533.2-201ENST00000543664 586 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
ZIC3O60481 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.16■□□□□ 0.18
ZIC3O60481 AL121772.3-201ENST00000610840 674 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.16■□□□□ 0.18
ZIC3O60481 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 TP73-AS1-210ENST00000637775 1455 ntBASIC16.16■□□□□ 0.18
ZIC3O60481 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ZIC3O60481 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ZIC3O60481 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZIC3O60481 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms