Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.81■■□□□ 1.08
GRIN3BO60391 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.81■■□□□ 1.08
GRIN3BO60391 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.81■■□□□ 1.08
GRIN3BO60391 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.81■■□□□ 1.08
GRIN3BO60391 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.81■■□□□ 1.08
GRIN3BO60391 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 AL805961.1-202ENST00000641562 540 ntBASIC21.81■■□□□ 1.08
GRIN3BO60391 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.81■■□□□ 1.08
GRIN3BO60391 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 TUBB3P1-201ENST00000405796 1332 ntBASIC21.8■■□□□ 1.08
GRIN3BO60391 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.8■■□□□ 1.08
GRIN3BO60391 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
GRIN3BO60391 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
GRIN3BO60391 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GRIN3BO60391 AL512356.2-201ENST00000546955 174 ntBASIC21.8■■□□□ 1.08
GRIN3BO60391 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.8■■□□□ 1.08
GRIN3BO60391 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.8■■□□□ 1.08
GRIN3BO60391 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.8■■□□□ 1.08
GRIN3BO60391 AC084346.2-201ENST00000607097 949 ntBASIC21.8■■□□□ 1.08
GRIN3BO60391 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
GRIN3BO60391 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.8■■□□□ 1.08
GRIN3BO60391 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
GRIN3BO60391 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GRIN3BO60391 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
GRIN3BO60391 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.79■■□□□ 1.08
GRIN3BO60391 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 ARSEP1-201ENST00000420443 635 ntBASIC21.79■■□□□ 1.08
GRIN3BO60391 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 AL596325.1-201ENST00000563991 1082 ntBASIC21.79■■□□□ 1.08
GRIN3BO60391 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 GGTLC5P-201ENST00000617623 998 ntBASIC21.79■■□□□ 1.08
GRIN3BO60391 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 AC025048.6-201ENST00000634326 1161 ntBASIC21.79■■□□□ 1.08
GRIN3BO60391 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GRIN3BO60391 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
GRIN3BO60391 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
GRIN3BO60391 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.78■■□□□ 1.08
GRIN3BO60391 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
GRIN3BO60391 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GRIN3BO60391 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.78■■□□□ 1.08
GRIN3BO60391 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.78■■□□□ 1.08
GRIN3BO60391 KLF2P3-201ENST00000451977 1087 ntBASIC21.78■■□□□ 1.08
GRIN3BO60391 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.78■■□□□ 1.08
GRIN3BO60391 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GRIN3BO60391 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.78■■□□□ 1.08
GRIN3BO60391 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GRIN3BO60391 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIN3BO60391 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
GRIN3BO60391 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms