Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 KRT17P6-201ENST00000453795 1220 ntBASIC17.27■□□□□ 0.36
PRICKLE3O43900 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.27■□□□□ 0.36
PRICKLE3O43900 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRICKLE3O43900 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRICKLE3O43900 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRICKLE3O43900 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRICKLE3O43900 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PRICKLE3O43900 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.27■□□□□ 0.35
PRICKLE3O43900 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.27■□□□□ 0.35
PRICKLE3O43900 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRICKLE3O43900 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRICKLE3O43900 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
PRICKLE3O43900 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 AC012615.1-201ENST00000565797 1299 ntBASIC17.26■□□□□ 0.35
PRICKLE3O43900 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 AL138831.2-201ENST00000606564 490 ntBASIC17.26■□□□□ 0.35
PRICKLE3O43900 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PRICKLE3O43900 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 AC100803.2-201ENST00000562459 1963 ntBASIC17.26■□□□□ 0.35
PRICKLE3O43900 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRICKLE3O43900 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 AC125634.1-201ENST00000438758 1403 ntBASIC17.25■□□□□ 0.35
PRICKLE3O43900 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 Z69720.1-201ENST00000601483 472 ntBASIC17.25■□□□□ 0.35
PRICKLE3O43900 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRICKLE3O43900 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms