Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.64■□□□□ 0.41
TAF4O00268 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.64■□□□□ 0.41
TAF4O00268 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.64■□□□□ 0.41
TAF4O00268 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.64■□□□□ 0.41
TAF4O00268 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.64■□□□□ 0.41
TAF4O00268 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TAF4O00268 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TAF4O00268 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.63■□□□□ 0.41
TAF4O00268 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 GPX1P2-201ENST00000429271 606 ntBASIC17.63■□□□□ 0.41
TAF4O00268 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 AC091607.1-201ENST00000490318 1060 ntBASIC17.63■□□□□ 0.41
TAF4O00268 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.63■□□□□ 0.41
TAF4O00268 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.63■□□□□ 0.41
TAF4O00268 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TAF4O00268 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 AC083906.6-201ENST00000641366 219 ntBASIC17.63■□□□□ 0.41
TAF4O00268 AC079781.4-201ENST00000641908 219 ntBASIC17.63■□□□□ 0.41
TAF4O00268 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 AC104581.1-202ENST00000635932 2618 ntBASIC17.63■□□□□ 0.41
TAF4O00268 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TAF4O00268 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TAF4O00268 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TAF4O00268 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
TAF4O00268 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
TAF4O00268 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 AL023284.2-201ENST00000405850 579 ntBASIC17.62■□□□□ 0.41
TAF4O00268 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.62■□□□□ 0.41
TAF4O00268 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.62■□□□□ 0.41
TAF4O00268 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.62■□□□□ 0.41
TAF4O00268 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.62■□□□□ 0.41
TAF4O00268 AC116407.3-201ENST00000623905 1129 ntBASIC17.62■□□□□ 0.41
TAF4O00268 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.62■□□□□ 0.41
TAF4O00268 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TAF4O00268 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.62■□□□□ 0.41
TAF4O00268 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
TAF4O00268 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TAF4O00268 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.61■□□□□ 0.41
TAF4O00268 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms