Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.61□□□□□ -0.07
LINC00862A6NCI5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LINC00862A6NCI5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 TFP1-202ENST00000475455 1573 ntBASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 AC092171.3-201ENST00000610122 2651 ntBASIC14.6□□□□□ -0.07
LINC00862A6NCI5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 AC022532.1-201ENST00000624563 1728 ntBASIC14.6□□□□□ -0.07
LINC00862A6NCI5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00862A6NCI5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 AC116353.5-201ENST00000638148 1699 ntBASIC14.59□□□□□ -0.07
LINC00862A6NCI5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 SERBP1P1-201ENST00000396021 1160 ntBASIC14.59□□□□□ -0.07
LINC00862A6NCI5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00862A6NCI5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms