Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 HYMAI-201ENST00000635591 3347 ntBASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 AC068587.6-202ENST00000641839 5619 ntBASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-6A0A0B4J262 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 PCDHA1-201ENST00000378133 2726 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AL158047.1-201ENST00000445918 881 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 UBE2SP1-201ENST00000450587 669 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 C1QL1P1-201ENST00000568105 661 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AL359736.2-201ENST00000621992 437 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 TMEM191A-211ENST00000637163 1067 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 ZNF815P-204ENST00000434898 1737 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AC008741.2-201ENST00000612792 3115 ntBASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-6A0A0B4J262 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-6A0A0B4J262 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV8-6A0A0B4J262 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-6A0A0B4J262 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms