Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV26-1A0A087WT03 MTMR9LP-203ENST00000426597 1545 ntBASIC13.08□□□□□ -0.31
TRAV26-1A0A087WT03 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.08□□□□□ -0.31
TRAV26-1A0A087WT03 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 AC073508.3-201ENST00000619697 1419 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 AL031598.1-201ENST00000561511 1773 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 MIR564-202ENST00000385049 94 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 FAM210CP-201ENST00000445714 574 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 COX11P1-201ENST00000489116 835 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 AC034236.2-201ENST00000606662 1610 ntBASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV26-1A0A087WT03 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 CROCCP3-202ENST00000420820 1947 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 KRT18P23-201ENST00000435622 1283 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 NEK4P2-201ENST00000580004 1012 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 AC139887.4-201ENST00000607877 719 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 AL031432.5-201ENST00000641059 760 ntBASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV26-1A0A087WT03 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 AC135776.1-201ENST00000319817 2481 ntBASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
TRAV26-1A0A087WT03 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms