Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 AC104390.1-201ENST00000555663 520 ntBASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 RCC2P3-201ENST00000418112 1537 ntBASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB6Q9Y5F9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 AL121672.3-201ENST00000608644 468 ntBASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB6Q9Y5F9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 MIR564-202ENST00000385049 94 ntBASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 AC011498.5-201ENST00000592027 486 ntBASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 NPAP1P7-201ENST00000613027 823 ntBASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB6Q9Y5F9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms