Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH1Q9Y2L9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 MCRIP2P1-201ENST00000394346 511 ntBASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 BX276092.2-201ENST00000417668 665 ntBASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 AC005052.1-201ENST00000625181 2492 ntBASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH1Q9Y2L9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 FER1L4-210ENST00000615531 5998 ntBASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH1Q9Y2L9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH1Q9Y2L9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms