Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 LINC00602-201ENST00000629776 2065 ntBASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 AL139384.1-201ENST00000612143 3047 ntBASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.33■□□□□ 0.37
CNOT11Q9UKZ1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 TMPOP1-202ENST00000424642 1267 ntBASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 LIN28AP1-201ENST00000429574 405 ntBASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT11Q9UKZ1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 HCG11-201ENST00000411553 5696 ntBASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 KRT8P3-201ENST00000519669 1449 ntBASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 MIR4674-201ENST00000582457 87 ntBASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT11Q9UKZ1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 ATP5G1P1-201ENST00000448724 379 ntBASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT11Q9UKZ1 AL138966.2-201ENST00000621997 464 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms