Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 ELK2BP-201ENST00000415014 1224 ntBASIC20.47■□□□□ 0.87
CPA4Q9UI42 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.47■□□□□ 0.87
CPA4Q9UI42 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPA4Q9UI42 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 AC108073.2-201ENST00000464002 357 ntBASIC20.46■□□□□ 0.87
CPA4Q9UI42 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPA4Q9UI42 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.46■□□□□ 0.87
CPA4Q9UI42 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 AC132938.6-201ENST00000623828 1655 ntBASIC20.45■□□□□ 0.86
CPA4Q9UI42 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 VN2R19P-201ENST00000442399 1052 ntBASIC20.45■□□□□ 0.86
CPA4Q9UI42 CEND1P1-201ENST00000451006 455 ntBASIC20.45■□□□□ 0.86
CPA4Q9UI42 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 AL589182.2-201ENST00000619332 1049 ntBASIC20.45■□□□□ 0.86
CPA4Q9UI42 AC004706.3-202ENST00000621574 984 ntBASIC20.45■□□□□ 0.86
CPA4Q9UI42 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPA4Q9UI42 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
CPA4Q9UI42 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 GPR89P-201ENST00000407924 1495 ntBASIC20.44■□□□□ 0.86
CPA4Q9UI42 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 MIR770-201ENST00000390219 98 ntBASIC20.44■□□□□ 0.86
CPA4Q9UI42 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AC122714.2-201ENST00000502787 707 ntBASIC20.44■□□□□ 0.86
CPA4Q9UI42 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPA4Q9UI42 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 AC073592.5-201ENST00000624854 528 ntBASIC20.44■□□□□ 0.86
CPA4Q9UI42 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.44■□□□□ 0.86
CPA4Q9UI42 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms