Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 FDX1P1-201ENST00000449115 551 ntBASIC16.52■□□□□ 0.24
LRFN1Q9P244 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 MIR5100-201ENST00000579544 119 ntBASIC16.52■□□□□ 0.24
LRFN1Q9P244 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 AC005336.2-201ENST00000593183 939 ntBASIC16.52■□□□□ 0.24
LRFN1Q9P244 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 AC114341.1-201ENST00000618070 349 ntBASIC16.52■□□□□ 0.24
LRFN1Q9P244 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.52■□□□□ 0.23
LRFN1Q9P244 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.52■□□□□ 0.23
LRFN1Q9P244 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN1Q9P244 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 SAPCD2P3-201ENST00000455031 850 ntBASIC16.51■□□□□ 0.23
LRFN1Q9P244 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 AC009533.2-201ENST00000543664 586 ntBASIC16.51■□□□□ 0.23
LRFN1Q9P244 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 AC104692.2-201ENST00000603054 253 ntBASIC16.51■□□□□ 0.23
LRFN1Q9P244 AL121912.1-201ENST00000603683 238 ntBASIC16.51■□□□□ 0.23
LRFN1Q9P244 REXO1L6P-202ENST00000619970 1078 ntBASIC16.51■□□□□ 0.23
LRFN1Q9P244 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN1Q9P244 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN1Q9P244 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 TP73-AS1-210ENST00000637775 1455 ntBASIC16.5■□□□□ 0.23
LRFN1Q9P244 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 AKR1C7P-201ENST00000305623 895 ntBASIC16.5■□□□□ 0.23
LRFN1Q9P244 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRFN1Q9P244 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN1Q9P244 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms