Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.13■□□□□ 0.33
GIN1Q9NXP7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 KRT18P22-201ENST00000402024 1347 ntBASIC17.12■□□□□ 0.33
GIN1Q9NXP7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
GIN1Q9NXP7 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
GIN1Q9NXP7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GIN1Q9NXP7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 GMCL1P1-201ENST00000463439 1581 ntBASIC17.11■□□□□ 0.33
GIN1Q9NXP7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 AC145285.6-201ENST00000604632 637 ntBASIC17.11■□□□□ 0.33
GIN1Q9NXP7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 LINC01568-207ENST00000641790 1380 ntBASIC17.11■□□□□ 0.33
GIN1Q9NXP7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.11■□□□□ 0.33
GIN1Q9NXP7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 AC018695.7-201ENST00000624587 2492 ntBASIC17.1■□□□□ 0.33
GIN1Q9NXP7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GIN1Q9NXP7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms