Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AC093909.1-201ENST00000504731 1122 ntBASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AC012640.2-201ENST00000561606 901 ntBASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FBXO28Q9NVF7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 FAM220CP-201ENST00000395253 831 ntBASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 PMS2P1-201ENST00000431037 1228 ntBASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 AC025062.2-201ENST00000605477 670 ntBASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FBXO28Q9NVF7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 AC097374.2-201ENST00000618617 1306 ntBASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 RPL13AP23-201ENST00000480739 586 ntBASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 AC106730.1-201ENST00000566722 1090 ntBASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 NKAPP1-205ENST00000585790 367 ntBASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 AP000867.4-201ENST00000641616 219 ntBASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.65■□□□□ 0.9
FBXO28Q9NVF7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
FBXO28Q9NVF7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FBXO28Q9NVF7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 AC093503.3-201ENST00000624917 2352 ntBASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 AC096633.1-201ENST00000422446 749 ntBASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 POLD2P1-201ENST00000511220 997 ntBASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 AC006538.3-201ENST00000612495 578 ntBASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms