Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.04■□□□□ 0.48
MRM3Q9HC36 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRM3Q9HC36 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 HOMER2P1-201ENST00000455653 964 ntBASIC18.03■□□□□ 0.48
MRM3Q9HC36 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRM3Q9HC36 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRM3Q9HC36 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MRM3Q9HC36 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
MRM3Q9HC36 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 RNF152P1-201ENST00000397754 604 ntBASIC18.02■□□□□ 0.48
MRM3Q9HC36 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
MRM3Q9HC36 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
MRM3Q9HC36 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
MRM3Q9HC36 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 AL049597.2-201ENST00000565575 961 ntBASIC18.02■□□□□ 0.48
MRM3Q9HC36 AC009154.2-201ENST00000621177 724 ntBASIC18.02■□□□□ 0.48
MRM3Q9HC36 AL590326.2-201ENST00000625139 305 ntBASIC18.02■□□□□ 0.48
MRM3Q9HC36 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRM3Q9HC36 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
MRM3Q9HC36 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
MRM3Q9HC36 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.02■□□□□ 0.47
MRM3Q9HC36 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRM3Q9HC36 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 MIR662-201ENST00000384847 95 ntBASIC18.01■□□□□ 0.47
MRM3Q9HC36 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRM3Q9HC36 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.01■□□□□ 0.47
MRM3Q9HC36 TSPY5P-201ENST00000426936 936 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms