Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 FZD10-202ENST00000539839 3282 ntBASIC16.09■□□□□ 0.17
NELFAQ9H3P2 AL096828.2-201ENST00000567259 1965 ntBASIC16.09■□□□□ 0.17
NELFAQ9H3P2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.09■□□□□ 0.17
NELFAQ9H3P2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 VENTXP5-201ENST00000523979 775 ntBASIC16.09■□□□□ 0.17
NELFAQ9H3P2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 LINC01311-201ENST00000565162 1445 ntBASIC16.09■□□□□ 0.17
NELFAQ9H3P2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFAQ9H3P2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFAQ9H3P2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
NELFAQ9H3P2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NELFAQ9H3P2 AL024508.2-201ENST00000607749 1894 ntBASIC16.08■□□□□ 0.17
NELFAQ9H3P2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 AC008687.5-201ENST00000593746 558 ntBASIC16.08■□□□□ 0.16
NELFAQ9H3P2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NELFAQ9H3P2 AC138028.4-201ENST00000564984 1845 ntBASIC16.08■□□□□ 0.16
NELFAQ9H3P2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.07■□□□□ 0.16
NELFAQ9H3P2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 LINC01126-201ENST00000623515 1646 ntBASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms