Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC015911.4-201ENST00000588022 1070 ntBASIC19.51■□□□□ 0.71
ALPK3Q96L96 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC004835.2-201ENST00000603762 682 ntBASIC19.51■□□□□ 0.71
ALPK3Q96L96 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 OR8S1-201ENST00000310194 1080 ntBASIC19.5■□□□□ 0.71
ALPK3Q96L96 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 AC073592.5-201ENST00000624854 528 ntBASIC19.5■□□□□ 0.71
ALPK3Q96L96 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALPK3Q96L96 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.5■□□□□ 0.71
ALPK3Q96L96 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALPK3Q96L96 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALPK3Q96L96 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 TSPY16P-201ENST00000449843 468 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 AC051619.7-201ENST00000568314 623 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALPK3Q96L96 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALPK3Q96L96 LINC01006-201ENST00000333319 2292 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 AC003669.1-201ENST00000334569 611 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 GK-202ENST00000378941 458 ntTSL 3 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALPK3Q96L96 KRT18P32-201ENST00000424695 1287 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 DUX4L27-201ENST00000554796 1261 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 OR7E47P-204ENST00000575924 449 ntBASIC19.49■□□□□ 0.71
ALPK3Q96L96 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.49■□□□□ 0.71
ALPK3Q96L96 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 AL353593.2-201ENST00000602529 1483 ntBASIC19.48■□□□□ 0.71
ALPK3Q96L96 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.48■□□□□ 0.71
ALPK3Q96L96 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ALPK3Q96L96 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALPK3Q96L96 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 CRB3P1-201ENST00000449338 276 ntBASIC19.47■□□□□ 0.71
ALPK3Q96L96 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 AC025678.2-201ENST00000562061 970 ntBASIC19.47■□□□□ 0.71
ALPK3Q96L96 AC008761.3-201ENST00000624803 892 ntBASIC19.47■□□□□ 0.71
ALPK3Q96L96 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 AC006116.8-202ENST00000587620 1550 ntBASIC19.47■□□□□ 0.71
ALPK3Q96L96 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALPK3Q96L96 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.47■□□□□ 0.71
ALPK3Q96L96 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms