Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 FITM1-202ENST00000559294 800 ntBASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COX4I2Q96KJ9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 PCDHB19P-201ENST00000570871 2371 ntBASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 AP002982.1-201ENST00000492365 877 ntBASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 AC010947.1-201ENST00000623454 693 ntBASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COX4I2Q96KJ9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COX4I2Q96KJ9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 CYP2D8P-201ENST00000433633 1490 ntBASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.76■□□□□ 0.27
COX4I2Q96KJ9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COX4I2Q96KJ9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms