Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AC008622.2-201ENST00000617006 1229 ntBASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 AC132938.6-201ENST00000623828 1655 ntBASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM2Q96JY6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 AC132872.4-202ENST00000622924 2756 ntBASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms