Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.59■□□□□ 0.57
IFT43Q96FT9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
IFT43Q96FT9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
IFT43Q96FT9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
IFT43Q96FT9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IFT43Q96FT9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IFT43Q96FT9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
IFT43Q96FT9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.58■□□□□ 0.57
IFT43Q96FT9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IFT43Q96FT9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
IFT43Q96FT9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 AC083849.1-201ENST00000615227 514 ntBASIC18.58■□□□□ 0.56
IFT43Q96FT9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 GMCL1P1-201ENST00000463439 1581 ntBASIC18.58■□□□□ 0.56
IFT43Q96FT9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.58■□□□□ 0.56
IFT43Q96FT9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT43Q96FT9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 LINC01311-201ENST00000565162 1445 ntBASIC18.57■□□□□ 0.56
IFT43Q96FT9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 MIR3917-201ENST00000580971 93 ntBASIC18.57■□□□□ 0.56
IFT43Q96FT9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.57■□□□□ 0.56
IFT43Q96FT9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 AC067852.2-201ENST00000590513 2313 ntBASIC18.57■□□□□ 0.56
IFT43Q96FT9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 SDHAP2-201ENST00000455183 2001 ntBASIC18.57■□□□□ 0.56
IFT43Q96FT9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IFT43Q96FT9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms