Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 LINC01238-205ENST00000567549 1107 ntBASIC19.3■□□□□ 0.68
LMO3Q8TAP4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMO3Q8TAP4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 AL355312.1-201ENST00000407115 2176 ntBASIC19.29■□□□□ 0.68
LMO3Q8TAP4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 AL645929.1-201ENST00000420084 975 ntBASIC19.29■□□□□ 0.68
LMO3Q8TAP4 MTCL1P1-201ENST00000446207 792 ntBASIC19.29■□□□□ 0.68
LMO3Q8TAP4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO3Q8TAP4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 REXO1L11P-201ENST00000620964 1927 ntBASIC19.28■□□□□ 0.68
LMO3Q8TAP4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.28■□□□□ 0.68
LMO3Q8TAP4 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.28■□□□□ 0.68
LMO3Q8TAP4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO3Q8TAP4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 RN7SL606P-201ENST00000472779 293 ntBASIC19.27■□□□□ 0.68
LMO3Q8TAP4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO3Q8TAP4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms