Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AC112907.2-201ENST00000448639 330 ntBASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH19Q8TAB3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 MIR662-201ENST00000384847 95 ntBASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 KRT18P48-201ENST00000434763 852 ntBASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 AC004263.2-201ENST00000617183 678 ntBASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 LINC00896-202ENST00000609602 2128 ntBASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH19Q8TAB3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 AL031133.1-201ENST00000406807 723 ntBASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 VENTXP5-201ENST00000523979 775 ntBASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 AL358472.4-201ENST00000633140 710 ntBASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms