Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 SLC25A6P4-201ENST00000586535 553 ntBASIC20.42■□□□□ 0.86
RETREG2Q8NC44 AC124864.1-201ENST00000623408 392 ntBASIC20.42■□□□□ 0.86
RETREG2Q8NC44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 AL163051.1-201ENST00000569214 1512 ntBASIC20.42■□□□□ 0.86
RETREG2Q8NC44 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETREG2Q8NC44 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 KRT16P4-201ENST00000453883 522 ntBASIC20.41■□□□□ 0.86
RETREG2Q8NC44 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 AC024563.2-201ENST00000603282 481 ntBASIC20.41■□□□□ 0.86
RETREG2Q8NC44 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RETREG2Q8NC44 AC018470.1-201ENST00000624790 3129 ntBASIC20.4■□□□□ 0.86
RETREG2Q8NC44 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 AC006538.3-201ENST00000612495 578 ntBASIC20.4■□□□□ 0.86
RETREG2Q8NC44 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETREG2Q8NC44 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RETREG2Q8NC44 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 AL133373.2-201ENST00000623187 2828 ntBASIC20.39■□□□□ 0.85
RETREG2Q8NC44 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 IGHGP-201ENST00000390555 1178 ntBASIC20.39■□□□□ 0.85
RETREG2Q8NC44 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 AL592071.1-201ENST00000611956 408 ntBASIC20.39■□□□□ 0.85
RETREG2Q8NC44 AC004263.2-201ENST00000617183 678 ntBASIC20.39■□□□□ 0.85
RETREG2Q8NC44 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.39■□□□□ 0.85
RETREG2Q8NC44 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms