Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 TBC1D3P5-201ENST00000579401 1545 ntBASIC26.53■■□□□ 1.84
ABCA6Q8N139 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 GREM1-201ENST00000560677 623 ntTSL 4 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
ABCA6Q8N139 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA6Q8N139 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 S100A2-206ENST00000497140 697 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 PRR29-209ENST00000582540 967 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA6Q8N139 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
ABCA6Q8N139 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC26.51■■□□□ 1.84
ABCA6Q8N139 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.51■■□□□ 1.84
ABCA6Q8N139 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 RHOQP3-201ENST00000437982 621 ntBASIC26.51■■□□□ 1.83
ABCA6Q8N139 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 OR7E47P-204ENST00000575924 449 ntBASIC26.51■■□□□ 1.83
ABCA6Q8N139 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA6Q8N139 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA6Q8N139 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA6Q8N139 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC26.51■■□□□ 1.83
ABCA6Q8N139 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA6Q8N139 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA6Q8N139 GID4-202ENST00000376345 1391 ntTSL 3 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 AC004877.2-201ENST00000623941 599 ntBASIC26.5■■□□□ 1.83
ABCA6Q8N139 AC092902.6-201ENST00000641783 218 ntBASIC26.5■■□□□ 1.83
ABCA6Q8N139 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 PTMS-202ENST00000389462 773 ntTSL 2 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 HLA-J-203ENST00000494367 1087 ntBASIC26.5■■□□□ 1.83
ABCA6Q8N139 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 AC109322.1-201ENST00000524499 1264 ntBASIC26.5■■□□□ 1.83
ABCA6Q8N139 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA6Q8N139 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 AC093010.1-201ENST00000473625 1624 ntBASIC26.5■■□□□ 1.83
ABCA6Q8N139 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA6Q8N139 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA6Q8N139 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA6Q8N139 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA6Q8N139 SIRPAP1-201ENST00000448467 1770 ntBASIC26.49■■□□□ 1.83
ABCA6Q8N139 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA6Q8N139 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.49■■□□□ 1.83
ABCA6Q8N139 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC26.49■■□□□ 1.83
ABCA6Q8N139 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC26.49■■□□□ 1.83
ABCA6Q8N139 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC26.49■■□□□ 1.83
ABCA6Q8N139 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms