Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ECEL1P3-201ENST00000427961 737 ntBASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 NEK4P2-201ENST00000580004 1012 ntBASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MIR3917-201ENST00000580971 93 ntBASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 AL157888.1-201ENST00000631930 593 ntBASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 AC092865.7-201ENST00000641832 219 ntBASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00346Q8IVM7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 AC141257.4-201ENST00000634557 245 ntBASIC15.97■□□□□ 0.15
LINC00346Q8IVM7 AC136944.6-201ENST00000634818 245 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms