Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 TSPY6P-201ENST00000448518 926 ntBASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AC133552.2-202ENST00000575694 574 ntBASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AL591742.1-201ENST00000604433 565 ntBASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AC093677.2-201ENST00000600169 1863 ntBASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 PAUPAR-201ENST00000630360 2965 ntBASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AC016405.3-201ENST00000607710 860 ntBASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM88Q6PEY1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM88Q6PEY1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM88Q6PEY1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM88Q6PEY1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM88Q6PEY1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM88Q6PEY1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 OR10C1-204ENST00000622521 1039 ntBASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms