Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KRT40Q6A162 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
KRT40Q6A162 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.9■□□□□ 0.94
KRT40Q6A162 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT40Q6A162 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.9■□□□□ 0.94
KRT40Q6A162 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.9■□□□□ 0.94
KRT40Q6A162 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT40Q6A162 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT40Q6A162 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT40Q6A162 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT40Q6A162 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 PCDHB18P-201ENST00000524813 2368 ntBASIC20.89■□□□□ 0.94
KRT40Q6A162 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT40Q6A162 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT40Q6A162 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
KRT40Q6A162 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT40Q6A162 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
KRT40Q6A162 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 HLA-F-220ENST00000434407 884 ntBASIC20.89■□□□□ 0.93
KRT40Q6A162 HOMER2P1-201ENST00000455653 964 ntBASIC20.89■□□□□ 0.93
KRT40Q6A162 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT40Q6A162 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.89■□□□□ 0.93
KRT40Q6A162 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT40Q6A162 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT40Q6A162 AC134043.2-201ENST00000624206 2238 ntBASIC20.89■□□□□ 0.93
KRT40Q6A162 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KRT40Q6A162 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT40Q6A162 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT40Q6A162 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
KRT40Q6A162 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRT40Q6A162 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT40Q6A162 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT40Q6A162 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT40Q6A162 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT40Q6A162 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 AC024563.2-201ENST00000603282 481 ntBASIC20.88■□□□□ 0.93
KRT40Q6A162 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KRT40Q6A162 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
KRT40Q6A162 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT40Q6A162 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT40Q6A162 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
KRT40Q6A162 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 LINC00602-201ENST00000629776 2065 ntBASIC20.87■□□□□ 0.93
KRT40Q6A162 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT40Q6A162 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KRT40Q6A162 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT40Q6A162 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KRT40Q6A162 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT40Q6A162 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT40Q6A162 DUTP2-201ENST00000519164 463 ntBASIC20.87■□□□□ 0.93
KRT40Q6A162 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT40Q6A162 AC008687.5-201ENST00000593746 558 ntBASIC20.87■□□□□ 0.93
KRT40Q6A162 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms