Protein–RNA interactions for Protein: Q5T5M9

CCNJ, Cyclin-J, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJQ5T5M9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 FLJ13224-201ENST00000313737 1514 ntBASIC16.83■□□□□ 0.28
CCNJQ5T5M9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 AL031432.5-201ENST00000641059 760 ntBASIC16.83■□□□□ 0.28
CCNJQ5T5M9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJQ5T5M9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.82■□□□□ 0.28
CCNJQ5T5M9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 AC139713.2-201ENST00000641328 2723 ntBASIC16.82■□□□□ 0.28
CCNJQ5T5M9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJQ5T5M9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 AC132938.6-201ENST00000623828 1655 ntBASIC16.81■□□□□ 0.28
CCNJQ5T5M9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNJQ5T5M9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 TNRC18P3-201ENST00000441896 2691 ntBASIC16.8■□□□□ 0.28
CCNJQ5T5M9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNJQ5T5M9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms