Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 MINOS1P3-201ENST00000457048 203 ntBASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
SNAP47Q5SQN1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 KRT89P-201ENST00000620027 1478 ntBASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 NUS1P2-201ENST00000417358 873 ntBASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC091607.1-201ENST00000490318 1060 ntBASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 AC112777.1-201ENST00000540175 1423 ntBASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.53■□□□□ 0.4
SNAP47Q5SQN1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 RN7SL606P-201ENST00000472779 293 ntBASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNAP47Q5SQN1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 NSUN5P1-202ENST00000421140 1535 ntBASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 NSUN5P2-203ENST00000457352 1529 ntBASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.52■□□□□ 0.39
SNAP47Q5SQN1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAP47Q5SQN1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms