Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC6LQ2NKX8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 AC080038.1-201ENST00000611274 1154 ntBASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC6LQ2NKX8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 AC093010.1-201ENST00000473625 1624 ntBASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 PCDHB17P-201ENST00000539533 2393 ntBASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC6LQ2NKX8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC6LQ2NKX8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms