Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
COL10A1Q03692 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.23■□□□□ 0.03
COL10A1Q03692 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.23■□□□□ 0.03
COL10A1Q03692 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.23■□□□□ 0.03
COL10A1Q03692 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
COL10A1Q03692 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 AC093010.1-201ENST00000473625 1624 ntBASIC15.23■□□□□ 0.03
COL10A1Q03692 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 AC068880.1-201ENST00000507289 2297 ntBASIC15.23■□□□□ 0.03
COL10A1Q03692 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.23■□□□□ 0.03
COL10A1Q03692 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.23■□□□□ 0.03
COL10A1Q03692 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL10A1Q03692 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL10A1Q03692 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.22■□□□□ 0.03
COL10A1Q03692 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.22■□□□□ 0.03
COL10A1Q03692 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
COL10A1Q03692 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.22■□□□□ 0.03
COL10A1Q03692 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.22■□□□□ 0.03
COL10A1Q03692 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
COL10A1Q03692 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.22■□□□□ 0.03
COL10A1Q03692 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.22■□□□□ 0.03
COL10A1Q03692 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
COL10A1Q03692 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL10A1Q03692 FLJ13224-201ENST00000313737 1514 ntBASIC15.22■□□□□ 0.03
COL10A1Q03692 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.22■□□□□ 0.03
COL10A1Q03692 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL10A1Q03692 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COL10A1Q03692 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COL10A1Q03692 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
COL10A1Q03692 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
COL10A1Q03692 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.21■□□□□ 0.03
COL10A1Q03692 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
COL10A1Q03692 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 SPDYE15P-201ENST00000424157 909 ntBASIC15.21■□□□□ 0.03
COL10A1Q03692 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.21■□□□□ 0.03
COL10A1Q03692 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.21■□□□□ 0.03
COL10A1Q03692 AC008687.5-201ENST00000593746 558 ntBASIC15.21■□□□□ 0.03
COL10A1Q03692 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms