Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 AC060834.1-201ENST00000443027 2032 ntBASIC18.87■□□□□ 0.61
CBX1P83916 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX1P83916 AC233992.3-201ENST00000607491 485 ntBASIC18.87■□□□□ 0.61
CBX1P83916 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 AL358852.1-201ENST00000623174 1268 ntBASIC18.87■□□□□ 0.61
CBX1P83916 MYC-208ENST00000641036 567 ntBASIC18.87■□□□□ 0.61
CBX1P83916 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 AC116351.2-201ENST00000606540 1585 ntBASIC18.86■□□□□ 0.61
CBX1P83916 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX1P83916 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX1P83916 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX1P83916 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 CDV3P1-201ENST00000471403 739 ntBASIC18.86■□□□□ 0.61
CBX1P83916 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.86■□□□□ 0.61
CBX1P83916 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX1P83916 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CBX1P83916 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 CYP2T1P-202ENST00000641596 2535 ntBASIC18.86■□□□□ 0.61
CBX1P83916 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CBX1P83916 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX1P83916 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX1P83916 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX1P83916 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CBX1P83916 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 GUSBP5-201ENST00000418136 578 ntBASIC18.85■□□□□ 0.61
CBX1P83916 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX1P83916 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CBX1P83916 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX1P83916 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX1P83916 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms