Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NKX6-1P78426 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-1P78426 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-1P78426 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
NKX6-1P78426 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-1P78426 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.9■□□□□ 0.14
NKX6-1P78426 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.9■□□□□ 0.14
NKX6-1P78426 AC009065.1-201ENST00000564055 1225 ntBASIC15.9■□□□□ 0.14
NKX6-1P78426 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-1P78426 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NKX6-1P78426 AC104692.2-201ENST00000603054 253 ntBASIC15.9■□□□□ 0.14
NKX6-1P78426 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NKX6-1P78426 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-1P78426 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
NKX6-1P78426 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX6-1P78426 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX6-1P78426 AC112777.1-201ENST00000540175 1423 ntBASIC15.89■□□□□ 0.13
NKX6-1P78426 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NKX6-1P78426 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 AC079781.3-201ENST00000449110 356 ntBASIC15.89■□□□□ 0.13
NKX6-1P78426 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX6-1P78426 FOSL1P1-201ENST00000511041 816 ntBASIC15.89■□□□□ 0.13
NKX6-1P78426 AL136038.4-201ENST00000603606 1261 ntBASIC15.89■□□□□ 0.13
NKX6-1P78426 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NKX6-1P78426 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX6-1P78426 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-1P78426 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-1P78426 AL391807.1-203ENST00000604392 2365 ntBASIC15.89■□□□□ 0.13
NKX6-1P78426 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NKX6-1P78426 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 NOC2LP1-202ENST00000452600 2235 ntBASIC15.88■□□□□ 0.13
NKX6-1P78426 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX6-1P78426 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX6-1P78426 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX6-1P78426 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX6-1P78426 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
NKX6-1P78426 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.88■□□□□ 0.13
NKX6-1P78426 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.88■□□□□ 0.13
NKX6-1P78426 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 AL662844.1-201ENST00000546340 181 ntBASIC15.88■□□□□ 0.13
NKX6-1P78426 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-1P78426 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX6-1P78426 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
NKX6-1P78426 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-1P78426 AL163051.1-201ENST00000569214 1512 ntBASIC15.88■□□□□ 0.13
NKX6-1P78426 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX6-1P78426 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms