Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC067852.2-201ENST00000590513 2313 ntBASIC18.24■□□□□ 0.51
WNT3AP56704 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.24■□□□□ 0.51
WNT3AP56704 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
WNT3AP56704 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
WNT3AP56704 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.23■□□□□ 0.51
WNT3AP56704 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.23■□□□□ 0.51
WNT3AP56704 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.23■□□□□ 0.51
WNT3AP56704 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.23■□□□□ 0.51
WNT3AP56704 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.23■□□□□ 0.51
WNT3AP56704 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
WNT3AP56704 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
WNT3AP56704 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
WNT3AP56704 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
WNT3AP56704 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
WNT3AP56704 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.22■□□□□ 0.51
WNT3AP56704 KRT18P65-201ENST00000439811 1286 ntBASIC18.22■□□□□ 0.51
WNT3AP56704 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.22■□□□□ 0.51
WNT3AP56704 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.22■□□□□ 0.51
WNT3AP56704 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.22■□□□□ 0.51
WNT3AP56704 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.22■□□□□ 0.51
WNT3AP56704 RNF126P1-202ENST00000569893 925 ntBASIC18.22■□□□□ 0.51
WNT3AP56704 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.22■□□□□ 0.51
WNT3AP56704 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
WNT3AP56704 AC100803.2-201ENST00000562459 1963 ntBASIC18.22■□□□□ 0.51
WNT3AP56704 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 AC022898.2-201ENST00000616822 1312 ntBASIC18.22■□□□□ 0.51
WNT3AP56704 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
WNT3AP56704 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
WNT3AP56704 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
WNT3AP56704 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
WNT3AP56704 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
WNT3AP56704 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.21■□□□□ 0.51
WNT3AP56704 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.21■□□□□ 0.51
WNT3AP56704 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
WNT3AP56704 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.21■□□□□ 0.51
WNT3AP56704 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.21■□□□□ 0.51
WNT3AP56704 AC005332.3-201ENST00000589904 676 ntBASIC18.21■□□□□ 0.51
WNT3AP56704 NTF6B-201ENST00000591913 560 ntBASIC18.21■□□□□ 0.51
WNT3AP56704 GPR32P1-201ENST00000601788 811 ntBASIC18.21■□□□□ 0.51
WNT3AP56704 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.21■□□□□ 0.51
WNT3AP56704 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.21■□□□□ 0.51
WNT3AP56704 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms