Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDH8P55286 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.23■□□□□ 0.67
CDH8P55286 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDH8P55286 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDH8P55286 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
CDH8P55286 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH8P55286 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH8P55286 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH8P55286 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH8P55286 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDH8P55286 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH8P55286 AC100803.2-201ENST00000562459 1963 ntBASIC19.23■□□□□ 0.67
CDH8P55286 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CDH8P55286 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 DRAXINP1-201ENST00000437611 948 ntBASIC19.22■□□□□ 0.67
CDH8P55286 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 TOB2P1-201ENST00000469761 992 ntBASIC19.22■□□□□ 0.67
CDH8P55286 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 AC112698.1-201ENST00000510299 916 ntBASIC19.22■□□□□ 0.67
CDH8P55286 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.22■□□□□ 0.67
CDH8P55286 AP005901.3-202ENST00000581653 237 ntBASIC19.22■□□□□ 0.67
CDH8P55286 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.22■□□□□ 0.67
CDH8P55286 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.22■□□□□ 0.67
CDH8P55286 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH8P55286 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH8P55286 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH8P55286 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH8P55286 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH8P55286 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 HCG4P8-203ENST00000443049 980 ntBASIC19.21■□□□□ 0.67
CDH8P55286 LINC00265-3P-201ENST00000447588 903 ntBASIC19.21■□□□□ 0.67
CDH8P55286 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH8P55286 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH8P55286 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CDH8P55286 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH8P55286 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDH8P55286 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH8P55286 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms