Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC4P55056 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC4P55056 IFNL4P1-201ENST00000607083 540 ntBASIC13.21□□□□□ -0.29
APOC4P55056 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.21□□□□□ -0.29
APOC4P55056 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.21□□□□□ -0.29
APOC4P55056 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC4P55056 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.21□□□□□ -0.3
APOC4P55056 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
APOC4P55056 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
APOC4P55056 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
APOC4P55056 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
APOC4P55056 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOC4P55056 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 CROCCP3-202ENST00000420820 1947 ntBASIC13.2□□□□□ -0.3
APOC4P55056 AC018445.3-201ENST00000624177 1945 ntBASIC13.2□□□□□ -0.3
APOC4P55056 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APOC4P55056 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC4P55056 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 IGHV3-47-201ENST00000425060 335 ntBASIC13.2□□□□□ -0.3
APOC4P55056 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC4P55056 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC4P55056 AC068472.1-201ENST00000474589 881 ntBASIC13.2□□□□□ -0.3
APOC4P55056 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC4P55056 AC096582.2-201ENST00000510860 516 ntBASIC13.2□□□□□ -0.3
APOC4P55056 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.2□□□□□ -0.3
APOC4P55056 AC009533.2-201ENST00000543664 586 ntBASIC13.2□□□□□ -0.3
APOC4P55056 RN7SL510P-201ENST00000581311 263 ntBASIC13.2□□□□□ -0.3
APOC4P55056 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 AL353801.3-201ENST00000609898 542 ntBASIC13.2□□□□□ -0.3
APOC4P55056 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 ESPNP-201ENST00000270691 2015 ntBASIC13.2□□□□□ -0.3
APOC4P55056 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC4P55056 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC4P55056 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC4P55056 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOC4P55056 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.19□□□□□ -0.3
APOC4P55056 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms