Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PHGDH-209ENST00000641074 1780 ntBASIC18.78■□□□□ 0.6
EPHB3P54753 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 AC022898.2-201ENST00000616822 1312 ntBASIC18.78■□□□□ 0.6
EPHB3P54753 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EPHB3P54753 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.78■□□□□ 0.6
EPHB3P54753 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.78■□□□□ 0.6
EPHB3P54753 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EPHB3P54753 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHB3P54753 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 AC093010.1-201ENST00000473625 1624 ntBASIC18.78■□□□□ 0.6
EPHB3P54753 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHB3P54753 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
EPHB3P54753 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.77■□□□□ 0.6
EPHB3P54753 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
EPHB3P54753 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHB3P54753 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHB3P54753 AC007967.3-201ENST00000434308 558 ntBASIC18.77■□□□□ 0.6
EPHB3P54753 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.77■□□□□ 0.6
EPHB3P54753 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
EPHB3P54753 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.77■□□□□ 0.6
EPHB3P54753 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.77■□□□□ 0.6
EPHB3P54753 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHB3P54753 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHB3P54753 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
EPHB3P54753 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
EPHB3P54753 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHB3P54753 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.77■□□□□ 0.59
EPHB3P54753 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
EPHB3P54753 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
EPHB3P54753 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 AL356309.3-201ENST00000624132 1934 ntBASIC18.76■□□□□ 0.59
EPHB3P54753 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.76■□□□□ 0.59
EPHB3P54753 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.76■□□□□ 0.59
EPHB3P54753 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.76■□□□□ 0.59
EPHB3P54753 AF228730.7-201ENST00000641842 219 ntBASIC18.76■□□□□ 0.59
EPHB3P54753 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
EPHB3P54753 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
EPHB3P54753 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHB3P54753 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
EPHB3P54753 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
EPHB3P54753 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
EPHB3P54753 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
EPHB3P54753 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EPHB3P54753 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.75■□□□□ 0.59
EPHB3P54753 SART3-203ENST00000546611 1184 ntBASIC18.75■□□□□ 0.59
EPHB3P54753 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms