Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDR1P51861 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR1P51861 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDR1P51861 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.75■□□□□ 0.75
CDR1P51861 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDR1P51861 MTMR9LP-203ENST00000426597 1545 ntBASIC19.75■□□□□ 0.75
CDR1P51861 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDR1P51861 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR1P51861 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.75■□□□□ 0.75
CDR1P51861 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR1P51861 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CDR1P51861 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.74■□□□□ 0.75
CDR1P51861 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.74■□□□□ 0.75
CDR1P51861 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.74■□□□□ 0.75
CDR1P51861 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.74■□□□□ 0.75
CDR1P51861 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDR1P51861 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDR1P51861 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.73■□□□□ 0.75
CDR1P51861 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.73■□□□□ 0.75
CDR1P51861 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 HEIH-201ENST00000623091 1652 ntBASIC19.73■□□□□ 0.75
CDR1P51861 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.73■□□□□ 0.75
CDR1P51861 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR1P51861 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CDR1P51861 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.73■□□□□ 0.75
CDR1P51861 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR1P51861 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.73■□□□□ 0.75
CDR1P51861 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR1P51861 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CDR1P51861 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.73■□□□□ 0.75
CDR1P51861 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 BICD1-207ENST00000551848 1962 ntBASIC19.73■□□□□ 0.75
CDR1P51861 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
CDR1P51861 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDR1P51861 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDR1P51861 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.72■□□□□ 0.75
CDR1P51861 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.72■□□□□ 0.75
CDR1P51861 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 AL354751.1-201ENST00000412768 1863 ntBASIC19.72■□□□□ 0.75
CDR1P51861 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDR1P51861 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CDR1P51861 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDR1P51861 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR1P51861 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDR1P51861 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR1P51861 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.71■□□□□ 0.75
CDR1P51861 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR1P51861 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.71■□□□□ 0.75
CDR1P51861 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR1P51861 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.71■□□□□ 0.75
CDR1P51861 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms