Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCNKAP51800 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLCNKAP51800 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCNKAP51800 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCNKAP51800 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCNKAP51800 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 AC093010.1-201ENST00000473625 1624 ntBASIC17.66■□□□□ 0.42
CLCNKAP51800 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLCNKAP51800 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 MTCL1P1-201ENST00000446207 792 ntBASIC17.66■□□□□ 0.42
CLCNKAP51800 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCNKAP51800 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCNKAP51800 AP005901.3-202ENST00000581653 237 ntBASIC17.66■□□□□ 0.42
CLCNKAP51800 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCNKAP51800 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLCNKAP51800 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCNKAP51800 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CLCNKAP51800 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCNKAP51800 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCNKAP51800 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCNKAP51800 AC132938.6-201ENST00000623828 1655 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCNKAP51800 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLCNKAP51800 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCNKAP51800 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 TSPY19P-201ENST00000418461 509 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 TSPY18P-201ENST00000441642 509 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCNKAP51800 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCNKAP51800 AC074051.2-201ENST00000565115 352 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 AC012313.10-201ENST00000623509 926 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCNKAP51800 AL096828.2-201ENST00000567259 1965 ntBASIC17.65■□□□□ 0.42
CLCNKAP51800 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCNKAP51800 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCNKAP51800 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCNKAP51800 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCNKAP51800 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCNKAP51800 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLCNKAP51800 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms