Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.06■□□□□ 0.32
GABRA4P48169 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GABRA4P48169 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
GABRA4P48169 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.06■□□□□ 0.32
GABRA4P48169 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.06■□□□□ 0.32
GABRA4P48169 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.06■□□□□ 0.32
GABRA4P48169 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GABRA4P48169 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GABRA4P48169 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
GABRA4P48169 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GABRA4P48169 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 AC026396.1-201ENST00000419388 421 ntBASIC17.05■□□□□ 0.32
GABRA4P48169 AC096633.1-201ENST00000422446 749 ntBASIC17.05■□□□□ 0.32
GABRA4P48169 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
GABRA4P48169 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GABRA4P48169 LINC01711-201ENST00000598340 967 ntBASIC17.05■□□□□ 0.32
GABRA4P48169 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GABRA4P48169 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.05■□□□□ 0.32
GABRA4P48169 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.05■□□□□ 0.32
GABRA4P48169 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.05■□□□□ 0.32
GABRA4P48169 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GABRA4P48169 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.04■□□□□ 0.32
GABRA4P48169 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GABRA4P48169 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GABRA4P48169 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GABRA4P48169 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.04■□□□□ 0.32
GABRA4P48169 AF238378.1-201ENST00000526806 358 ntBASIC17.04■□□□□ 0.32
GABRA4P48169 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.04■□□□□ 0.32
GABRA4P48169 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.04■□□□□ 0.32
GABRA4P48169 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GABRA4P48169 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 AC104581.1-202ENST00000635932 2618 ntBASIC17.04■□□□□ 0.32
GABRA4P48169 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.04■□□□□ 0.32
GABRA4P48169 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.04■□□□□ 0.32
GABRA4P48169 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
GABRA4P48169 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GABRA4P48169 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GABRA4P48169 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.04■□□□□ 0.32
GABRA4P48169 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GABRA4P48169 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GABRA4P48169 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 AL020996.1-203ENST00000536896 2307 ntBASIC17.03■□□□□ 0.32
GABRA4P48169 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRA4P48169 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GABRA4P48169 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 SAPCD2P3-201ENST00000455031 850 ntBASIC17.03■□□□□ 0.32
GABRA4P48169 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
GABRA4P48169 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.03■□□□□ 0.32
GABRA4P48169 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GABRA4P48169 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GABRA4P48169 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms