Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRPHP41219 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 AL353692.3-201ENST00000407031 1396 ntBASIC20.37■□□□□ 0.85
PRPHP41219 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRPHP41219 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PRPHP41219 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.37■□□□□ 0.85
PRPHP41219 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.37■□□□□ 0.85
PRPHP41219 AL049597.2-201ENST00000565575 961 ntBASIC20.37■□□□□ 0.85
PRPHP41219 AL390719.2-201ENST00000606993 987 ntBASIC20.37■□□□□ 0.85
PRPHP41219 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.37■□□□□ 0.85
PRPHP41219 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
PRPHP41219 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRPHP41219 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRPHP41219 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.37■□□□□ 0.85
PRPHP41219 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PRPHP41219 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRPHP41219 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.36■□□□□ 0.85
PRPHP41219 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.36■□□□□ 0.85
PRPHP41219 AL136038.3-201ENST00000561909 1096 ntBASIC20.36■□□□□ 0.85
PRPHP41219 AC005332.3-201ENST00000589904 676 ntBASIC20.36■□□□□ 0.85
PRPHP41219 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.36■□□□□ 0.85
PRPHP41219 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.36■□□□□ 0.85
PRPHP41219 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.36■□□□□ 0.85
PRPHP41219 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPHP41219 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPHP41219 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPHP41219 AC018470.1-201ENST00000624790 3129 ntBASIC20.36■□□□□ 0.85
PRPHP41219 AL133373.2-201ENST00000623187 2828 ntBASIC20.35■□□□□ 0.85
PRPHP41219 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 AC006116.8-202ENST00000587620 1550 ntBASIC20.35■□□□□ 0.85
PRPHP41219 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.35■□□□□ 0.85
PRPHP41219 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.35■□□□□ 0.85
PRPHP41219 RNF126P1-202ENST00000569893 925 ntBASIC20.35■□□□□ 0.85
PRPHP41219 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPHP41219 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPHP41219 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPHP41219 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms