Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN3P26045 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN3P26045 AC012317.2-201ENST00000623305 2251 ntBASIC18.4■□□□□ 0.54
PTPN3P26045 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN3P26045 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTPN3P26045 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 AC006116.8-202ENST00000587620 1550 ntBASIC18.4■□□□□ 0.54
PTPN3P26045 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN3P26045 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTPN3P26045 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPN3P26045 AC092647.4-201ENST00000457211 535 ntBASIC18.4■□□□□ 0.54
PTPN3P26045 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN3P26045 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
PTPN3P26045 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPN3P26045 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPN3P26045 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
PTPN3P26045 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTPN3P26045 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN3P26045 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN3P26045 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN3P26045 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN3P26045 AC026471.1-201ENST00000564629 3026 ntBASIC18.39■□□□□ 0.54
PTPN3P26045 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN3P26045 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN3P26045 MIR662-201ENST00000384847 95 ntBASIC18.39■□□□□ 0.53
PTPN3P26045 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN3P26045 TMPOP1-202ENST00000424642 1267 ntBASIC18.39■□□□□ 0.53
PTPN3P26045 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 DUX4L26-201ENST00000489078 1255 ntBASIC18.39■□□□□ 0.53
PTPN3P26045 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 VENTXP5-201ENST00000523979 775 ntBASIC18.39■□□□□ 0.53
PTPN3P26045 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.39■□□□□ 0.53
PTPN3P26045 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN3P26045 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN3P26045 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PTPN3P26045 AC004263.2-201ENST00000617183 678 ntBASIC18.39■□□□□ 0.53
PTPN3P26045 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PTPN3P26045 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTPN3P26045 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN3P26045 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN3P26045 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN3P26045 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PTPN3P26045 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN3P26045 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN3P26045 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN3P26045 AC022616.7-201ENST00000525383 220 ntBASIC18.38■□□□□ 0.53
PTPN3P26045 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN3P26045 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN3P26045 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTPN3P26045 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN3P26045 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTPN3P26045 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN3P26045 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN3P26045 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms