Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NTF3P20783 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NTF3P20783 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.75□□□□□ -0.21
NTF3P20783 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NTF3P20783 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NTF3P20783 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NTF3P20783 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.75□□□□□ -0.21
NTF3P20783 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 AC006015.1-201ENST00000429970 570 ntBASIC13.74□□□□□ -0.21
NTF3P20783 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.74□□□□□ -0.21
NTF3P20783 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.74□□□□□ -0.21
NTF3P20783 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NTF3P20783 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.74□□□□□ -0.21
NTF3P20783 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NTF3P20783 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NTF3P20783 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NTF3P20783 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
NTF3P20783 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NTF3P20783 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.73□□□□□ -0.21
NTF3P20783 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NTF3P20783 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.73□□□□□ -0.21
NTF3P20783 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 MYC-208ENST00000641036 567 ntBASIC13.73□□□□□ -0.21
NTF3P20783 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.73□□□□□ -0.21
NTF3P20783 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
NTF3P20783 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NTF3P20783 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.73□□□□□ -0.21
NTF3P20783 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NTF3P20783 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms