Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
RAB4AP20338 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB4AP20338 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB4AP20338 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
RAB4AP20338 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RAB4AP20338 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 CYP2T3P-201ENST00000601990 817 ntBASIC13.85□□□□□ -0.19
RAB4AP20338 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB4AP20338 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB4AP20338 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAB4AP20338 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB4AP20338 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB4AP20338 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB4AP20338 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB4AP20338 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.84□□□□□ -0.19
RAB4AP20338 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB4AP20338 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAB4AP20338 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB4AP20338 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB4AP20338 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB4AP20338 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.83□□□□□ -0.19
RAB4AP20338 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms